{
  "_id": "6a1f2e78b401979e73426a91",
  "Package": "epicmodel",
  "Title": "Causal Modeling in Epidemiology",
  "Version": "0.2.1.9000",
  "Authors@R": "person(\"Felix\", \"Forster\", , \"forsterepi@gmail.com\", role = c(\"aut\", \"cre\", \"cph\"),\ncomment = c(ORCID = \"0000-0002-3670-9244\"))",
  "Description": "Create causal models for use in epidemiological studies,\nincluding sufficient-component cause models as introduced by\nRothman (1976) <doi:10.1093/oxfordjournals.aje.a112335>.",
  "License": "GPL (>= 3)",
  "Encoding": "UTF-8",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.3.3",
  "Config/testthat/edition": "3",
  "LazyData": "true",
  "VignetteBuilder": "knitr",
  "URL": "https://forsterepi.github.io/epicmodel/,\nhttps://github.com/forsterepi/epicmodel",
  "BugReports": "https://github.com/forsterepi/epicmodel/issues",
  "Config/pak/sysreqs": "cmake libglpk-dev make libicu-dev libuv1-dev\nlibxml2-dev libssl-dev libnode-dev libx11-dev zlib1g-dev",
  "Repository": "https://forsterepi.r-universe.dev",
  "Date/Publication": "2025-12-15 20:58:52 UTC",
  "RemoteUrl": "https://github.com/forsterepi/epicmodel",
  "RemoteRef": "HEAD",
  "RemoteSha": "e63971ce1d2eec01678a0353c12e63a78b078a15",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-15 09:28:33 UTC",
    "User": "root"
  },
  "Author": "Felix Forster [aut, cre, cph] (ORCID:\n<https://orcid.org/0000-0002-3670-9244>)",
  "Maintainer": "Felix Forster <forsterepi@gmail.com>",
  "MD5sum": "ae66aa9ad0caef5930dd405417622e0a",
  "_user": "forsterepi",
  "_type": "src",
  "_file": "epicmodel_0.2.1.9000.tar.gz",
  "_fileid": "dfd872d99bd5f32922b946ade58e2f2202edc8d97293c67a9c5920b2e6d23826",
  "_filesize": 915304,
  "_sha256": "dfd872d99bd5f32922b946ade58e2f2202edc8d97293c67a9c5920b2e6d23826",
  "_created": "2026-05-15T09:28:33.000Z",
  "_published": "2026-06-02T19:26:48.979Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79154167650,
      "time": 247,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7014130391"
    },
    {
      "job": 79154168291,
      "time": 240,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7014128822"
    },
    {
      "job": 79154167937,
      "time": 243,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7014122514"
    },
    {
      "job": 79154167966,
      "time": 197,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7014110378"
    },
    {
      "job": 79154167683,
      "time": 223,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7014058231"
    },
    {
      "job": 79154167345,
      "time": 141,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7367720143"
    },
    {
      "job": 79154167864,
      "time": 195,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7014115999"
    },
    {
      "job": 79154168070,
      "time": 218,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7014122075"
    },
    {
      "job": 79154168188,
      "time": 185,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7014112752"
    }
  ],
  "_buildurl": "https://github.com/r-universe/forsterepi/actions/runs/25910452756",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/forsterepi/epicmodel",
  "_commit": {
    "id": "e63971ce1d2eec01678a0353c12e63a78b078a15",
    "author": "Felix Forster <fforster1@gmx.de>",
    "committer": "Felix Forster <fforster1@gmx.de>",
    "message": "Increment version number to 0.2.1.9000\n",
    "time": 1765832332
  },
  "_maintainer": {
    "name": "Felix Forster",
    "email": "forsterepi@gmail.com",
    "orcid": "0000-0002-3670-9244"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
    },
    {
      "package": "magrittr",
      "role": "Depends"
    },
    {
      "package": "checkmate",
      "role": "Imports"
    },
    {
      "package": "cli",
      "role": "Imports"
    },
    {
      "package": "dagitty",
      "role": "Imports"
    },
    {
      "package": "DiagrammeR",
      "role": "Imports"
    },
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "DT",
      "role": "Imports"
    },
    {
      "package": "ggplot2",
      "role": "Imports"
    },
    {
      "package": "gtools",
      "role": "Imports"
    },
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "prompter",
      "role": "Imports"
    },
    {
      "package": "purrr",
      "role": "Imports"
    },
    {
      "package": "rlang",
      "role": "Imports"
    },
    {
      "package": "shiny",
      "role": "Imports"
    },
    {
      "package": "shinyalert",
      "role": "Imports"
    },
    {
      "package": "shinyjs",
      "role": "Imports"
    },
    {
      "package": "shinythemes",
      "role": "Imports"
    },
    {
      "package": "spsUtil",
      "role": "Imports"
    },
    {
      "package": "stringr",
      "role": "Imports"
    },
    {
      "package": "tibble",
      "role": "Imports"
    },
    {
      "package": "tidyr",
      "role": "Imports"
    },
    {
      "package": "ggdag",
      "role": "Suggests"
    },
    {
      "package": "ggforce",
      "role": "Suggests"
    },
    {
      "package": "ggraph",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    }
  ],
  "_owner": "forsterepi",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-50",
      "n": 8
    },
    {
      "week": "2025-51",
      "n": 1
    }
  ],
  "_tags": [
    {
      "name": "v0.2.1",
      "date": "2025-12-14"
    }
  ],
  "_stars": 0,
  "_contributors": [
    {
      "user": "forsterepi",
      "count": 46,
      "uuid": 29664922
    }
  ],
  "_userbio": {
    "uuid": 29664922,
    "type": "user",
    "name": "Felix Forster",
    "description": "Environmental/Occupational Epidemiologist"
  },
  "_downloads": {
    "count": 223,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/epicmodel"
  },
  "_devurl": "https://github.com/forsterepi/epicmodel",
  "_pkgdown": "https://forsterepi.github.io/epicmodel/",
  "_searchresults": 6,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/epicmodel.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/forsterepi/epicmodel",
  "_realowner": "forsterepi",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.1",
      "date": "2024-11-08"
    },
    {
      "version": "0.2.0",
      "date": "2024-12-11"
    },
    {
      "version": "0.2.1",
      "date": "2025-12-15"
    }
  ],
  "_exports": [
    "are_sufficient",
    "check_steplist",
    "create_scc",
    "effect_size",
    "empty_scc",
    "empty_steplist",
    "export_mechanism",
    "intervene",
    "launch_steplist_creator",
    "mechanism",
    "necessary_causes",
    "new_mechanism",
    "new_scc",
    "new_steplist",
    "plot_dag",
    "prevent",
    "remove_all_modules",
    "remove_na",
    "remove_segment",
    "sc_contain_steps",
    "scc_cause_sets",
    "scc_to_dag",
    "show_steps",
    "uncheck_steplist",
    "validate_mechanism",
    "validate_scc",
    "validate_steplist"
  ],
  "_datasets": [
    {
      "name": "scc_rain",
      "title": "Rain example SCC model",
      "object": "scc_rain",
      "class": [
        "epicmodel_scc"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "steplist_party",
      "title": "Birthday party example steplist",
      "object": "steplist_party",
      "class": [
        "epicmodel_steplist"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "steplist_rain",
      "title": "Rain example steplist",
      "object": "steplist_rain",
      "class": [
        "epicmodel_steplist"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    }
  ],
  "_help": [
    {
      "page": "are_sufficient",
      "title": "Check if a certain set of component causes is suffcient",
      "topics": [
        "are_sufficient"
      ]
    },
    {
      "page": "check_steplist",
      "title": "Check 'epicmodel_steplist' class objects",
      "topics": [
        "check_steplist"
      ]
    },
    {
      "page": "create_scc",
      "title": "Creating SCC models",
      "topics": [
        "create_scc"
      ]
    },
    {
      "page": "effect_size",
      "title": "Determine standardized effect size of component causes",
      "topics": [
        "effect_size"
      ]
    },
    {
      "page": "export_mechanism",
      "title": "Export mechanisms",
      "topics": [
        "export_mechanism"
      ]
    },
    {
      "page": "intervene",
      "title": "Explore effect of interventions",
      "topics": [
        "intervene"
      ]
    },
    {
      "page": "launch_steplist_creator",
      "title": "Launch steplist creator 'shiny' app",
      "topics": [
        "launch_steplist_creator"
      ]
    },
    {
      "page": "mechanism",
      "title": "Investigate mechanisms",
      "topics": [
        "mechanism",
        "new_mechanism",
        "plot.epicmodel_mechanism",
        "print.epicmodel_mechanism",
        "validate_mechanism"
      ]
    },
    {
      "page": "necessary_causes",
      "title": "Extract necessary causes",
      "topics": [
        "necessary_causes"
      ]
    },
    {
      "page": "epicmodel_scc",
      "title": "SCC model objects",
      "topics": [
        "empty_scc",
        "new_scc",
        "plot.epicmodel_scc",
        "print.epicmodel_scc",
        "summary.epicmodel_scc",
        "validate_scc"
      ]
    },
    {
      "page": "epicmodel_steplist",
      "title": "Steplist objects",
      "topics": [
        "empty_steplist",
        "new_steplist",
        "plot.epicmodel_steplist",
        "plot.epicmodel_steplist_checked",
        "print.epicmodel_steplist",
        "print.epicmodel_steplist_checked",
        "summary.epicmodel_steplist",
        "summary.epicmodel_steplist_checked",
        "validate_steplist"
      ]
    },
    {
      "page": "plot_dag",
      "title": "Plot DAG",
      "topics": [
        "plot_dag"
      ]
    },
    {
      "page": "prevent",
      "title": "Explore effect of prevention",
      "topics": [
        "prevent"
      ]
    },
    {
      "page": "remove_all_modules",
      "title": "Remove all modules",
      "topics": [
        "remove_all_modules"
      ]
    },
    {
      "page": "remove_na",
      "title": "Removing NA in 'icc' and 'outc'",
      "topics": [
        "remove_na"
      ]
    },
    {
      "page": "remove_segment",
      "title": "Remove segments",
      "topics": [
        "remove_segment"
      ]
    },
    {
      "page": "sc_contain_steps",
      "title": "Do steps appear in sufficient causes?",
      "topics": [
        "sc_contain_steps"
      ]
    },
    {
      "page": "scc_cause_sets",
      "title": "Extracting component causes from SCC model",
      "topics": [
        "scc_cause_sets"
      ]
    },
    {
      "page": "scc_rain",
      "title": "Rain example SCC model",
      "topics": [
        "scc_rain"
      ]
    },
    {
      "page": "scc_to_dag",
      "title": "Transform SCC to DAG",
      "topics": [
        "scc_to_dag"
      ]
    },
    {
      "page": "show_steps",
      "title": "Show all steps of a SCC model",
      "topics": [
        "show_steps"
      ]
    },
    {
      "page": "steplist_party",
      "title": "Birthday party example steplist",
      "topics": [
        "steplist_party"
      ]
    },
    {
      "page": "steplist_rain",
      "title": "Rain example steplist",
      "topics": [
        "steplist_rain"
      ]
    },
    {
      "page": "uncheck_steplist",
      "title": "Unchecking 'epicmodel_steplist' objects",
      "topics": [
        "uncheck_steplist"
      ]
    }
  ],
  "_pkglogo": "https://github.com/forsterepi/epicmodel/raw/HEAD/man/figures/logo.png",
  "_readme": "https://github.com/forsterepi/epicmodel/raw/HEAD/README.md",
  "_rundeps": [
    "askpass",
    "assertthat",
    "backports",
    "base64enc",
    "bit",
    "bit64",
    "boot",
    "bslib",
    "cachem",
    "checkmate",
    "cli",
    "clipr",
    "commonmark",
    "cpp11",
    "crayon",
    "crosstalk",
    "curl",
    "dagitty",
    "DiagrammeR",
    "digest",
    "dplyr",
    "DT",
    "evaluate",
    "farver",
    "fastmap",
    "fontawesome",
    "fs",
    "generics",
    "ggplot2",
    "glue",
    "gtable",
    "gtools",
    "highr",
    "hms",
    "htmltools",
    "htmlwidgets",
    "httpuv",
    "httr",
    "igraph",
    "isoband",
    "jquerylib",
    "jsonlite",
    "knitr",
    "labeling",
    "later",
    "lattice",
    "lazyeval",
    "lifecycle",
    "magrittr",
    "MASS",
    "Matrix",
    "memoise",
    "mime",
    "openssl",
    "otel",
    "pillar",
    "pkgconfig",
    "prettyunits",
    "progress",
    "promises",
    "prompter",
    "purrr",
    "R6",
    "rappdirs",
    "RColorBrewer",
    "Rcpp",
    "readr",
    "rlang",
    "rmarkdown",
    "rstudioapi",
    "S7",
    "sass",
    "scales",
    "shiny",
    "shinyalert",
    "shinyjs",
    "shinythemes",
    "sourcetools",
    "spsUtil",
    "stringi",
    "stringr",
    "sys",
    "tibble",
    "tidyr",
    "tidyselect",
    "tinytex",
    "tzdb",
    "utf8",
    "uuid",
    "V8",
    "vctrs",
    "viridisLite",
    "visNetwork",
    "vroom",
    "withr",
    "xfun",
    "xtable",
    "yaml"
  ],
  "_vignettes": [
    {
      "source": "epicmodel.Rmd",
      "filename": "epicmodel.html",
      "title": "epicmodel",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Task 1: Create steplist",
        "Task 2: Create SCC model from steplist",
        "Task 3: Use SCC model",
        "Causal pies",
        "Standardized effect size",
        "Mechanisms",
        "Interventions",
        "Prevention",
        "DAGs",
        "References"
      ],
      "created": "2024-10-31 10:57:30",
      "modified": "2024-12-08 13:23:09",
      "commits": 6
    },
    {
      "source": "glossary.Rmd",
      "filename": "glossary.html",
      "title": "Glossary",
      "engine": "knitr::rmarkdown",
      "headings": [],
      "created": "2024-10-31 10:57:30",
      "modified": "2024-12-08 13:23:09",
      "commits": 3
    },
    {
      "source": "modules.Rmd",
      "filename": "modules.html",
      "title": "Modules",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Define modules",
        "Plot steplist",
        "Mechanisms",
        "SCC model summary"
      ],
      "created": "2024-10-31 10:57:30",
      "modified": "2024-11-30 16:28:13",
      "commits": 2
    },
    {
      "source": "scc.Rmd",
      "filename": "scc.html",
      "title": "SCC Models",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Why SCC?",
        "How can SCC models be used?",
        "Algorithm for SCC model creation",
        "IFNOT conditions, sufficiency status, and the concept of time",
        "Unknown causes",
        "Other functions for SCC models",
        "Print all step IDs and descriptions",
        "Inspect if sufficient causes contain certain steps",
        "Get component causes as list",
        "Check sufficiency for a set of component causes",
        "Extract necessary causes",
        "References"
      ],
      "created": "2024-10-31 10:57:30",
      "modified": "2024-12-10 17:46:34",
      "commits": 5
    },
    {
      "source": "steplist.Rmd",
      "filename": "steplist.html",
      "title": "Steplists",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Input for SCC model creation",
        "Step structure",
        "THEN statements",
        "IF and IFNOT conditions",
        "Step types",
        "Steplist",
        "Additional step attributes",
        "Steplist elements",
        "Steplist creation",
        "Processing steplists in R",
        "Checked and unchecked steplists"
      ],
      "created": "2024-10-31 10:57:30",
      "modified": "2024-11-30 16:28:13",
      "commits": 4
    }
  ],
  "_score": 4.698970004336019,
  "_indexed": true,
  "_nocasepkg": "epicmodel",
  "_universes": [
    "forsterepi"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.2.1.9000",
      "date": "2026-05-15T09:31:17.000Z",
      "distro": "noble",
      "commit": "e63971ce1d2eec01678a0353c12e63a78b078a15",
      "fileid": "dd5d44205506a825d0f778513c63b153ccabb97e5b2ffc608d1c353e7e862b76",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/forsterepi/actions/runs/25910452756"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.2.1.9000",
      "date": "2026-05-15T09:31:07.000Z",
      "distro": "noble",
      "commit": "e63971ce1d2eec01678a0353c12e63a78b078a15",
      "fileid": "73fdff525c4590902500ab884737406d80c238988f41fe94c0adcf13d70b99a9",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/forsterepi/actions/runs/25910452756"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.2.1.9000",
      "date": "2026-05-15T09:31:22.000Z",
      "commit": "e63971ce1d2eec01678a0353c12e63a78b078a15",
      "fileid": "26dd6b0bcf601cc4b3133bee5a5d37fe371674f11eac114166a0a42ddb633596",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/forsterepi/actions/runs/25910452756"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.2.1.9000",
      "date": "2026-05-15T09:30:48.000Z",
      "commit": "e63971ce1d2eec01678a0353c12e63a78b078a15",
      "fileid": "b000fc4469e1da76dc65a8c23fb08b961bcc22fe4030032ffbf0fa5f090d2680",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/forsterepi/actions/runs/25910452756"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.2.1.9000",
      "date": "2026-05-15T09:29:59.000Z",
      "commit": "e63971ce1d2eec01678a0353c12e63a78b078a15",
      "fileid": "91a2a8db4961ad4f4333e1dbbd3811fb7c96097bda6a317afb72c8269dd632cc",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/forsterepi/actions/runs/25910452756"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.2.1.9000",
      "date": "2026-05-15T09:30:11.000Z",
      "commit": "e63971ce1d2eec01678a0353c12e63a78b078a15",
      "fileid": "844acbbe7df5c5b942fec0527301007329bd6ab2df4867001b74f440661db3ae",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/forsterepi/actions/runs/25910452756"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.2.1.9000",
      "date": "2026-05-15T09:29:48.000Z",
      "commit": "e63971ce1d2eec01678a0353c12e63a78b078a15",
      "fileid": "79fdc11d34f28eae98b1a574e7f1e7f1c155538c40a4b97e2147b801caffeff8",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/forsterepi/actions/runs/25910452756"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.2.1.9000",
      "date": "2026-06-02T19:26:34.000Z",
      "commit": "e63971ce1d2eec01678a0353c12e63a78b078a15",
      "fileid": "b9e439e8dd21690af327f2af727fcd0c5da3ef0c00ecc02deba7f504991a9d74",
      "status": "success",
      "buildurl": "https://github.com/r-universe/forsterepi/actions/runs/25910452756"
    }
  ]
}